{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 65454735, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59077183, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.26, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 71167991, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 69360747, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.46, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25165134, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2878819, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.114397
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 52830359, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1669713, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.031605
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25163140, 
            "distinct_read_pairs": 22431168, 
            "one_read_pair": 20175633, 
            "two_read_pair": 2019177, 
            "NRF": 0.89143, 
            "PBC1": 0.899446, 
            "PBC2": 9.992008
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 52683922, 
            "distinct_read_pairs": 51251295, 
            "one_read_pair": 49897863, 
            "two_read_pair": 1309573, 
            "NRF": 0.972807, 
            "PBC1": 0.973592, 
            "PBC2": 38.102391
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22286315, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22286315, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 51160646, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51160646, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 172665, 
        "Np": 0, 
        "N_opt": 172665, 
        "N_consv": 172665, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 80, 
            "corr_est_frag_len": 0.245592513002145, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.3362302, 
            "argmin_corr": 1500, 
            "min_corr": 0.2291254, 
            "NSC": 1.071869, 
            "RSC": 0.1537478
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.22274124402
        }, 
        "rep1-pr1": {
            "FRiP": 0.2586828354
        }, 
        "rep1-pr2": {
            "FRiP": 0.257398723139
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.163468487016
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.218845130249, 
            "auc": 0.48758598133, 
            "ch_div": 0.186196458846, 
            "elbow_pt": 9.6013682277e-55, 
            "jsd": 0.655045424011, 
            "syn_auc": 0.51462812102, 
            "syn_elbow_pt": 0.192531592376, 
            "syn_jsd": 0.326985993532
        }
    ]
}