{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 50562069, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48998199, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.91, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 61611229, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 60630034, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.41, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 37309172, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2105671, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.056438
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 46325783, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 746573, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016116
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37306588, 
            "distinct_read_pairs": 35307317, 
            "one_read_pair": 33426263, 
            "two_read_pair": 1784009, 
            "NRF": 0.94641, 
            "PBC1": 0.946723, 
            "PBC2": 18.7366
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 46231723, 
            "distinct_read_pairs": 45607350, 
            "one_read_pair": 45027212, 
            "two_read_pair": 570114, 
            "NRF": 0.986495, 
            "PBC1": 0.98728, 
            "PBC2": 78.979313
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 35203501, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35203501, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 45579210, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45579210, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 83530, 
        "Np": 0, 
        "N_opt": 83530, 
        "N_consv": 83530, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 265, 
            "corr_est_frag_len": 0.185610914445479, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1990254, 
            "argmin_corr": 1500, 
            "min_corr": 0.1794279, 
            "NSC": 1.034459, 
            "RSC": 0.3154983
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.308199122583
        }, 
        "rep1-pr1": {
            "FRiP": 0.276298722217
        }, 
        "rep1-pr2": {
            "FRiP": 0.276545717501
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.267820319431
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.21746957883, 
            "auc": 0.490119066682, 
            "ch_div": 0.15420602789, 
            "elbow_pt": 5.44053586999e-87, 
            "jsd": 0.685002249213, 
            "syn_auc": 0.491979004064, 
            "syn_elbow_pt": 0.222409420986, 
            "syn_jsd": 0.354430897257
        }
    ]
}
