{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 81113800, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80203509, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.88, 
            "paired": 81113800, 
            "paired_qc_failed": 0, 
            "read1": 40556900, 
            "read1_qc_failed": 0, 
            "read2": 40556900, 
            "read2_qc_failed": 0, 
            "paired_properly": 79555478, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 98.08, 
            "with_itself": 80012708, 
            "with_itself_qc_failed": 0, 
            "singletons": 190801, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.24, 
            "diff_chroms": 254281, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 136790320, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132380851, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.78, 
            "paired": 136790320, 
            "paired_qc_failed": 0, 
            "read1": 68395160, 
            "read1_qc_failed": 0, 
            "read2": 68395160, 
            "read2_qc_failed": 0, 
            "paired_properly": 130092484, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.1, 
            "with_itself": 131677058, 
            "with_itself_qc_failed": 0, 
            "singletons": 703793, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.51, 
            "diff_chroms": 604160, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 37020786, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 200560, 
            "paired_opt_dupes": 1862, 
            "dupes_pct": 0.005417
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56350303, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 241110, 
            "paired_opt_dupes": 2032, 
            "dupes_pct": 0.004279
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37019939, 
            "distinct_read_pairs": 36819381, 
            "one_read_pair": 36619659, 
            "two_read_pair": 198893, 
            "NRF": 0.994582, 
            "PBC1": 0.994576, 
            "PBC2": 184.117385
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56321306, 
            "distinct_read_pairs": 56080639, 
            "one_read_pair": 55842177, 
            "two_read_pair": 236573, 
            "NRF": 0.995727, 
            "PBC1": 0.995748, 
            "PBC2": 236.046282
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 73640452, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 73640452, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 73640452, 
            "paired_qc_failed": 0, 
            "read1": 36820226, 
            "read1_qc_failed": 0, 
            "read2": 36820226, 
            "read2_qc_failed": 0, 
            "paired_properly": 73640452, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 73640452, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 112218386, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 112218386, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 112218386, 
            "paired_qc_failed": 0, 
            "read1": 56109193, 
            "read1_qc_failed": 0, 
            "read2": 56109193, 
            "read2_qc_failed": 0, 
            "paired_properly": 112218386, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 112218386, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 176577, 
        "Np": 0, 
        "N_opt": 176577, 
        "N_consv": 176577, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.223852172342186, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2171221, 
            "argmin_corr": 1500, 
            "min_corr": 0.1891924, 
            "NSC": 1.183199, 
            "RSC": 1.240965
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.495827564406
        }, 
        "rep1-pr1": {
            "FRiP": 0.46734331391
        }, 
        "rep1-pr2": {
            "FRiP": 0.467255778492
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.431044714439
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.138065244659, 
            "auc": 0.495270653654, 
            "ch_div": 0.231190158684, 
            "elbow_pt": 0.0, 
            "jsd": 0.756262283152, 
            "syn_auc": 0.504167993924, 
            "syn_elbow_pt": 0.28684754801, 
            "syn_jsd": 0.492365967419
        }
    ]
}