{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 169322156, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 125870625, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 74.34, 
            "paired": 169322156, 
            "paired_qc_failed": 0, 
            "read1": 84661078, 
            "read1_qc_failed": 0, 
            "read2": 84661078, 
            "read2_qc_failed": 0, 
            "paired_properly": 123140704, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 72.73, 
            "with_itself": 124552329, 
            "with_itself_qc_failed": 0, 
            "singletons": 1318296, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.78, 
            "diff_chroms": 575334, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 176817872, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 173073807, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.88, 
            "paired": 176817872, 
            "paired_qc_failed": 0, 
            "read1": 88408936, 
            "read1_qc_failed": 0, 
            "read2": 88408936, 
            "read2_qc_failed": 0, 
            "paired_properly": 171003617, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.71, 
            "with_itself": 172265942, 
            "with_itself_qc_failed": 0, 
            "singletons": 807865, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.46, 
            "diff_chroms": 503576, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 54666701, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 503073, 
            "paired_opt_dupes": 1815, 
            "dupes_pct": 0.009203
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 75220911, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 718589, 
            "paired_opt_dupes": 2612, 
            "dupes_pct": 0.009553
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 54659667, 
            "distinct_read_pairs": 54156676, 
            "one_read_pair": 53659621, 
            "two_read_pair": 491481, 
            "NRF": 0.990798, 
            "PBC1": 0.990822, 
            "PBC2": 109.179441
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 75167057, 
            "distinct_read_pairs": 74449701, 
            "one_read_pair": 73740092, 
            "two_read_pair": 702144, 
            "NRF": 0.990457, 
            "PBC1": 0.990469, 
            "PBC2": 105.021323
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 108327256, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 108327256, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 108327256, 
            "paired_qc_failed": 0, 
            "read1": 54163628, 
            "read1_qc_failed": 0, 
            "read2": 54163628, 
            "read2_qc_failed": 0, 
            "paired_properly": 108327256, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 108327256, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 149004644, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 149004644, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 149004644, 
            "paired_qc_failed": 0, 
            "read1": 74502322, 
            "read1_qc_failed": 0, 
            "read2": 74502322, 
            "read2_qc_failed": 0, 
            "paired_properly": 149004644, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 149004644, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 249352, 
        "Np": 0, 
        "N_opt": 249352, 
        "N_consv": 249352, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 115, 
            "corr_est_frag_len": 0.191856706034788, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2194393, 
            "argmin_corr": 1500, 
            "min_corr": 0.1757839, 
            "NSC": 1.091435, 
            "RSC": 0.3681735
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.353336752056
        }, 
        "rep1-pr1": {
            "FRiP": 0.325393585825
        }, 
        "rep1-pr2": {
            "FRiP": 0.325382451464
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.282226460871
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.201636235824, 
            "auc": 0.49609430342, 
            "ch_div": 0.143223851116, 
            "elbow_pt": 0.0, 
            "jsd": 0.677582901342, 
            "syn_auc": 0.499161896852, 
            "syn_elbow_pt": 0.14900348739, 
            "syn_jsd": 0.401470597681
        }
    ]
}