/cemt/A59693_3_lane_gembs/C8W89ANXX_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 500121358 | 100.00 % | 250060679 | 100.00 % | 250060679 | 100.00 % |
| General Reads | 478932450 | 95.76 % | 240142350 | 96.03 % | 238790100 | 95.49 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16068778 | 3.21 % | 8048502 | 3.22 % | 8020276 | 3.21 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5120130 | 1.02 % | 1869827 | 0.75 % | 3250303 | 1.30 % |
| Bisulfite_reads C2T | 252570559 | 50.50 % | 126622615 | 50.64 % | 125947944 | 50.37 % |
| Bisulfite_reads G2A | 242430669 | 48.47 % | 121568237 | 48.62 % | 120862432 | 48.33 % |
| Concept | Value |
|---|---|
| Unique Fragments | 214222243 |
| Average Unique | 85.67 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24741404719 | 39.26 % | 9767834168 | 31.00 % | 14973570551 | 47.52 % |
| Base Counts Overall C | 6474776688 | 10.27 % | 236596032 | 0.75 % | 6238180656 | 19.80 % |
| Base Counts Overall G | 6409091192 | 10.17 % | 6189384622 | 19.64 % | 219706570 | 0.70 % |
| Base Counts Overall T | 24842082106 | 39.42 % | 15049520150 | 47.76 % | 9792561956 | 31.08 % |
| Base Counts Overall N | 547936403 | 0.87 % | 264310582 | 0.84 % | 283625821 | 0.90 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9967277355719126 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 240289975 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 250060679 |
| 125 | 250060679 |
| Insert Size Histogram |
|---|
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