/cemt/A59693_3_lane_gembs/C8W89ANXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 499909496 | 100.00 % | 249954748 | 100.00 % | 249954748 | 100.00 % |
| General Reads | 478619137 | 95.74 % | 239972220 | 96.01 % | 238646917 | 95.48 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16078745 | 3.22 % | 8053277 | 3.22 % | 8025468 | 3.21 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5211614 | 1.04 % | 1929251 | 0.77 % | 3282363 | 1.31 % |
| Bisulfite_reads C2T | 252428399 | 50.49 % | 126543179 | 50.63 % | 125885220 | 50.36 % |
| Bisulfite_reads G2A | 242269483 | 48.46 % | 121482318 | 48.60 % | 120787165 | 48.32 % |
| Concept | Value |
|---|---|
| Unique Fragments | 214008024 |
| Average Unique | 85.62 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24731963442 | 39.26 % | 9762319476 | 31.00 % | 14969643966 | 47.53 % |
| Base Counts Overall C | 6468774300 | 10.27 % | 235589455 | 0.75 % | 6233184845 | 19.79 % |
| Base Counts Overall G | 6405822206 | 10.17 % | 6186271319 | 19.64 % | 219550887 | 0.70 % |
| Base Counts Overall T | 24830930762 | 39.42 % | 15046221888 | 47.77 % | 9784708874 | 31.07 % |
| Base Counts Overall N | 551105786 | 0.87 % | 263896110 | 0.84 % | 287209676 | 0.91 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9967552677468464 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 240086036 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 249954748 |
| 125 | 249954748 |
| Insert Size Histogram |
|---|
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