{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 119426994, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105094911, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.0, 
            "paired": 119426994, 
            "paired_qc_failed": 0, 
            "read1": 59713497, 
            "read1_qc_failed": 0, 
            "read2": 59713497, 
            "read2_qc_failed": 0, 
            "paired_properly": 103890516, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 86.99, 
            "with_itself": 104453403, 
            "with_itself_qc_failed": 0, 
            "singletons": 641508, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.54, 
            "diff_chroms": 272930, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 177519184, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 172494915, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.17, 
            "paired": 177519184, 
            "paired_qc_failed": 0, 
            "read1": 88759592, 
            "read1_qc_failed": 0, 
            "read2": 88759592, 
            "read2_qc_failed": 0, 
            "paired_properly": 168093297, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.69, 
            "with_itself": 170816950, 
            "with_itself_qc_failed": 0, 
            "singletons": 1677965, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.95, 
            "diff_chroms": 1509587, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 47905555, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 278010, 
            "paired_opt_dupes": 1830, 
            "dupes_pct": 0.005803
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 73622728, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 559519, 
            "paired_opt_dupes": 3080, 
            "dupes_pct": 0.0076
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 47903160, 
            "distinct_read_pairs": 47625166, 
            "one_read_pair": 47348575, 
            "two_read_pair": 275204, 
            "NRF": 0.994197, 
            "PBC1": 0.994192, 
            "PBC2": 172.049007
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 73528740, 
            "distinct_read_pairs": 72972791, 
            "one_read_pair": 72421080, 
            "two_read_pair": 547586, 
            "NRF": 0.992439, 
            "PBC1": 0.992439, 
            "PBC2": 132.255171
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 95255090, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 95255090, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 95255090, 
            "paired_qc_failed": 0, 
            "read1": 47627545, 
            "read1_qc_failed": 0, 
            "read2": 47627545, 
            "read2_qc_failed": 0, 
            "paired_properly": 95255090, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 95255090, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 146126418, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 146126418, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 146126418, 
            "paired_qc_failed": 0, 
            "read1": 73063209, 
            "read1_qc_failed": 0, 
            "read2": 73063209, 
            "read2_qc_failed": 0, 
            "paired_properly": 146126418, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 146126418, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 268152, 
        "Np": 0, 
        "N_opt": 268152, 
        "N_consv": 268152, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.199168442450045, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2059639, 
            "argmin_corr": 1500, 
            "min_corr": 0.1786066, 
            "NSC": 1.115124, 
            "RSC": 0.7516043
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.470545488492
        }, 
        "rep1-pr1": {
            "FRiP": 0.428866095711
        }, 
        "rep1-pr2": {
            "FRiP": 0.428586264665
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.392823565171
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.159261935971, 
            "auc": 0.495840042664, 
            "ch_div": 0.204467209673, 
            "elbow_pt": 0.0, 
            "jsd": 0.723494435981, 
            "syn_auc": 0.498131048725, 
            "syn_elbow_pt": 0.217927336153, 
            "syn_jsd": 0.4562035493
        }
    ]
}