/cemt/A59695_3_lane_gembs

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SAMPLE A59695_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1285956068 100.00 % 642978034 100.00 % 642978034 100.00 %
General Reads 1272576241 98.96 % 637967345 99.22 % 634608896 98.70 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1641537 0.13 % 822345 0.13 % 819192 0.13 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 11738290 0.91 % 4188344 0.65 % 7549946 1.17 %
Bisulfite_reads C2T 649398331 50.50 % 325500207 50.62 % 323898124 50.37 %
Bisulfite_reads G2A 624819447 48.59 % 313289483 48.72 % 311529964 48.45 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 551891813
Average Unique 85.83 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 63887949070 39.43 % 25589328722 31.59 % 38298620348 47.27 %
Base Counts Overall C 16378894175 10.11 % 614122108 0.76 % 15764772067 19.46 %
Base Counts Overall G 16274407558 10.04 % 15683281772 19.36 % 591125786 0.73 %
Base Counts Overall T 64058813632 39.54 % 38456708882 47.47 % 25602104750 31.60 %
Base Counts Overall N 1430400133 0.88 % 671790800 0.83 % 758609333 0.94 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9959505568238546
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 618209460



Mapping Quality

Mapping Quality Histogram
A59695_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A59695_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C957WANXX_6_1
C957WANXX_5_1
C90K7ANXX_7_1