/cemt/A59695_3_lane_gembs/C90K7ANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 412789434 | 100.00 % | 206394717 | 100.00 % | 206394717 | 100.00 % |
| General Reads | 408439292 | 98.95 % | 204780497 | 99.22 % | 203658795 | 98.67 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 534188 | 0.13 % | 267592 | 0.13 % | 266596 | 0.13 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3815954 | 0.92 % | 1346628 | 0.65 % | 2469326 | 1.20 % |
| Bisulfite_reads C2T | 208502678 | 50.51 % | 104518944 | 50.64 % | 103983734 | 50.38 % |
| Bisulfite_reads G2A | 200470802 | 48.56 % | 100529145 | 48.71 % | 99941657 | 48.42 % |
| Concept | Value |
|---|---|
| Unique Fragments | 177238118 |
| Average Unique | 85.87 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 20444323945 | 39.31 % | 8188860297 | 31.49 % | 12255463648 | 47.13 % |
| Base Counts Overall C | 5268686390 | 10.13 % | 194673358 | 0.75 % | 5074013032 | 19.51 % |
| Base Counts Overall G | 5229401895 | 10.05 % | 5041234155 | 19.39 % | 188167740 | 0.72 % |
| Base Counts Overall T | 20534551659 | 39.48 % | 12351813501 | 47.50 % | 8182738158 | 31.47 % |
| Base Counts Overall N | 534504795 | 1.03 % | 229153031 | 0.88 % | 305351764 | 1.17 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9963899243567893 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 198548433 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 206394717 |
| 125 | 206394717 |
| Insert Size Histogram |
|---|
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