{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 76192470, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48257766, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 63.34, 
            "paired": 76192470, 
            "paired_qc_failed": 0, 
            "read1": 38096235, 
            "read1_qc_failed": 0, 
            "read2": 38096235, 
            "read2_qc_failed": 0, 
            "paired_properly": 47348519, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 62.14, 
            "with_itself": 47593795, 
            "with_itself_qc_failed": 0, 
            "singletons": 663971, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.87, 
            "diff_chroms": 94644, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 192499798, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 188890798, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.13, 
            "paired": 192499798, 
            "paired_qc_failed": 0, 
            "read1": 96249899, 
            "read1_qc_failed": 0, 
            "read2": 96249899, 
            "read2_qc_failed": 0, 
            "paired_properly": 186811687, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.05, 
            "with_itself": 188072528, 
            "with_itself_qc_failed": 0, 
            "singletons": 818270, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.43, 
            "diff_chroms": 400341, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 21332840, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 130251, 
            "paired_opt_dupes": 1093, 
            "dupes_pct": 0.006106
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 81972176, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 587245, 
            "paired_opt_dupes": 4247, 
            "dupes_pct": 0.007164
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21331545, 
            "distinct_read_pairs": 21201306, 
            "one_read_pair": 21071676, 
            "two_read_pair": 129023, 
            "NRF": 0.993895, 
            "PBC1": 0.993886, 
            "PBC2": 163.317207
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81931652, 
            "distinct_read_pairs": 81345140, 
            "one_read_pair": 80765524, 
            "two_read_pair": 573498, 
            "NRF": 0.992841, 
            "PBC1": 0.992875, 
            "PBC2": 140.829652
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 42405178, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42405178, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 42405178, 
            "paired_qc_failed": 0, 
            "read1": 21202589, 
            "read1_qc_failed": 0, 
            "read2": 21202589, 
            "read2_qc_failed": 0, 
            "paired_properly": 42405178, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 42405178, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 162769862, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 162769862, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 162769862, 
            "paired_qc_failed": 0, 
            "read1": 81384931, 
            "read1_qc_failed": 0, 
            "read2": 81384931, 
            "read2_qc_failed": 0, 
            "paired_properly": 162769862, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 162769862, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 126893, 
        "Np": 0, 
        "N_opt": 126893, 
        "N_consv": 126893, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.187114334263055, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2204842, 
            "argmin_corr": 1500, 
            "min_corr": 0.1687311, 
            "NSC": 1.10895, 
            "RSC": 0.3552101
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.30228085949
        }, 
        "rep1-pr1": {
            "FRiP": 0.293694029981
        }, 
        "rep1-pr2": {
            "FRiP": 0.293824870977
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.202503633503
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.188807266551, 
            "auc": 0.493760268204, 
            "ch_div": 0.236098144153, 
            "elbow_pt": 4.01546106921e-220, 
            "jsd": 0.662173157698, 
            "syn_auc": 0.504392336847, 
            "syn_elbow_pt": 0.192006150184, 
            "syn_jsd": 0.377189387273
        }
    ]
}