/cemt/A59696_3_lane_gembs/C90K7ANXX_8_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 400393830 | 100.00 % | 200196915 | 100.00 % | 200196915 | 100.00 % |
| General Reads | 396287185 | 98.97 % | 198619176 | 99.21 % | 197668009 | 98.74 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 596130 | 0.15 % | 298555 | 0.15 % | 297575 | 0.15 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3510515 | 0.88 % | 1279184 | 0.64 % | 2231331 | 1.11 % |
| Bisulfite_reads C2T | 202353861 | 50.54 % | 101402056 | 50.65 % | 100951805 | 50.43 % |
| Bisulfite_reads G2A | 194529454 | 48.58 % | 97515675 | 48.71 % | 97013779 | 48.46 % |
| Concept | Value |
|---|---|
| Unique Fragments | 172273261 |
| Average Unique | 86.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 19842552885 | 39.33 % | 7853397164 | 31.13 % | 11989155721 | 47.53 % |
| Base Counts Overall C | 5122595367 | 10.15 % | 184115169 | 0.73 % | 4938480198 | 19.58 % |
| Base Counts Overall G | 5080748607 | 10.07 % | 4901001180 | 19.43 % | 179747427 | 0.71 % |
| Base Counts Overall T | 19946338024 | 39.54 % | 12063242168 | 47.82 % | 7883095856 | 31.25 % |
| Base Counts Overall N | 457387697 | 0.91 % | 223055609 | 0.88 % | 234332088 | 0.93 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9965704958859278 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 193025493 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 200196915 |
| 125 | 200196915 |
| Insert Size Histogram |
|---|
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