{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 62712931, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61314472, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.77, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38935874, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38262004, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.27, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 48622485, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1720851, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.035392
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30433411, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 373906, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.012286
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 48621724, 
            "distinct_read_pairs": 46953991, 
            "one_read_pair": 45351040, 
            "two_read_pair": 1549920, 
            "NRF": 0.9657, 
            "PBC1": 0.965861, 
            "PBC2": 29.260246
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30419500, 
            "distinct_read_pairs": 30061653, 
            "one_read_pair": 29749114, 
            "two_read_pair": 306954, 
            "NRF": 0.988236, 
            "PBC1": 0.989603, 
            "PBC2": 96.917173
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 46901634, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46901634, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 30059505, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30059505, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 61094, 
        "Np": 0, 
        "N_opt": 61094, 
        "N_consv": 61094, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.174252400196316, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1781182, 
            "argmin_corr": 1500, 
            "min_corr": 0.1707471, 
            "NSC": 1.020529, 
            "RSC": 0.4755468
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0765578929467
        }, 
        "rep1-pr1": {
            "FRiP": 0.105396202104
        }, 
        "rep1-pr2": {
            "FRiP": 0.105280895177
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0557516450853
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.261839121725, 
            "auc": 0.492074347709, 
            "ch_div": 0.12872468891, 
            "elbow_pt": 7.09355199631e-136, 
            "jsd": 0.592775343079, 
            "syn_auc": 0.493554854557, 
            "syn_elbow_pt": 0.107042444397, 
            "syn_jsd": 0.285909325863
        }
    ]
}
