{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 37026670, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35796628, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 64190449, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62768852, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.79, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32047511, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7866656, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.245469
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 50735160, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1848677, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.036438
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32045207, 
            "distinct_read_pairs": 24732701, 
            "one_read_pair": 19417869, 
            "two_read_pair": 3882119, 
            "NRF": 0.771807, 
            "PBC1": 0.785109, 
            "PBC2": 5.001874
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 50250873, 
            "distinct_read_pairs": 48904513, 
            "one_read_pair": 47627372, 
            "two_read_pair": 1243595, 
            "NRF": 0.973207, 
            "PBC1": 0.973885, 
            "PBC2": 38.298137
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24180855, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24180855, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 48886483, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48886483, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 30360, 
        "Np": 0, 
        "N_opt": 30360, 
        "N_consv": 30360, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.52852486776587, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.4914842, 
            "argmin_corr": 1500, 
            "min_corr": 0.1916689, 
            "NSC": 2.757489, 
            "RSC": 1.123545
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.697521294589
        }, 
        "rep1-pr1": {
            "FRiP": 0.692748540546
        }, 
        "rep1-pr2": {
            "FRiP": 0.692635714957
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.69075473702
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0642652541854, 
            "auc": 0.488927383039, 
            "ch_div": 0.387547583251, 
            "elbow_pt": 4.6947205356e-69, 
            "jsd": 0.929568791785, 
            "syn_auc": 0.507464066013, 
            "syn_elbow_pt": 0.598419174835, 
            "syn_jsd": 0.669786686921
        }
    ]
}
