{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 31123145, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30291284, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.33, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 28142272, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27871920, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 26227147, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 10978979, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.418611
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 22240348, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 357744, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016085
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26226114, 
            "distinct_read_pairs": 15586711, 
            "one_read_pair": 8929468, 
            "two_read_pair": 4031394, 
            "NRF": 0.59432, 
            "PBC1": 0.57289, 
            "PBC2": 2.214983
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22225755, 
            "distinct_read_pairs": 21879146, 
            "one_read_pair": 21558099, 
            "two_read_pair": 315244, 
            "NRF": 0.984405, 
            "PBC1": 0.985326, 
            "PBC2": 68.385438
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 15248168, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15248168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 21882604, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21882604, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 29465, 
        "Np": 0, 
        "N_opt": 29465, 
        "N_consv": 29465, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.27910033830435, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2363063, 
            "argmin_corr": 1500, 
            "min_corr": 0.1319024, 
            "NSC": 2.115961, 
            "RSC": 1.40989
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.43900226915
        }, 
        "rep1-pr1": {
            "FRiP": 0.431566755599
        }, 
        "rep1-pr2": {
            "FRiP": 0.431533233059
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.41152042763
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.113398992293, 
            "auc": 0.486054430179, 
            "ch_div": 0.403187690684, 
            "elbow_pt": 3.35992939544e-43, 
            "jsd": 0.777177542215, 
            "syn_auc": 0.509010757531, 
            "syn_elbow_pt": 0.406639453338, 
            "syn_jsd": 0.489087424614
        }
    ]
}