{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 53445653, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50796189, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42437420, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41766353, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.42, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 42925582, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2660678, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.061984
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33119124, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 555160, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016763
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 42924906, 
            "distinct_read_pairs": 40352361, 
            "one_read_pair": 37941706, 
            "two_read_pair": 2266278, 
            "NRF": 0.940069, 
            "PBC1": 0.94026, 
            "PBC2": 16.741859
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33104800, 
            "distinct_read_pairs": 32570466, 
            "one_read_pair": 32084740, 
            "two_read_pair": 476511, 
            "NRF": 0.983859, 
            "PBC1": 0.985087, 
            "PBC2": 67.332632
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 40264904, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40264904, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 32563964, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32563964, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 141803, 
        "Np": 0, 
        "N_opt": 141803, 
        "N_consv": 141803, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.199004289036854, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1992103, 
            "argmin_corr": 1500, 
            "min_corr": 0.1837267, 
            "NSC": 1.083154, 
            "RSC": 0.9866946
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.512322659191
        }, 
        "rep1-pr1": {
            "FRiP": 0.49648065233
        }, 
        "rep1-pr2": {
            "FRiP": 0.496967436149
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.485362460225
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.143983262363, 
            "auc": 0.491452463802, 
            "ch_div": 0.195053341224, 
            "elbow_pt": 1.18576539896e-116, 
            "jsd": 0.799354627171, 
            "syn_auc": 0.503040188957, 
            "syn_elbow_pt": 0.358903345911, 
            "syn_jsd": 0.483848187991
        }
    ]
}