/EXTERNAL BLUEPRINT/methylation/K006394_K006407_19_lane_gembs
BACK
SAMPLE K006394_K006407_19_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
27014975 |
24808749 |
91.83 % |
| NonRefCpG |
264404 |
202291 |
76.51 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
6270455 |
11.76 % |
5657975 |
11.22 % |
41962 |
8.33 % |
21776 |
5.19 % |
| Intermediate (0.3-0.7) |
5311130 |
9.96 % |
4595535 |
9.12 % |
66291 |
13.15 % |
43096 |
10.27 % |
| Methylated (0.7-1) |
41724389 |
78.27 % |
40153884 |
79.66 % |
395770 |
78.52 % |
354654 |
84.54 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.900 |
|
0.900 |
|
0.890 |
|
0.910 |
|