{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 53254907, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51377019, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.47, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 36591048, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36212288, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30210617, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3035514, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.100478
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28870269, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 605050, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.020958
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30210341, 
            "distinct_read_pairs": 27242265, 
            "one_read_pair": 24672501, 
            "two_read_pair": 2348317, 
            "NRF": 0.901753, 
            "PBC1": 0.90567, 
            "PBC2": 10.506461
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28859953, 
            "distinct_read_pairs": 28272912, 
            "one_read_pair": 27729604, 
            "two_read_pair": 531236, 
            "NRF": 0.979659, 
            "PBC1": 0.980783, 
            "PBC2": 52.198277
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 27175103, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27175103, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28265219, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28265219, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 72417, 
        "Np": 0, 
        "N_opt": 72417, 
        "N_consv": 72417, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.21359737799027, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2625578, 
            "argmin_corr": 1500, 
            "min_corr": 0.2023668, 
            "NSC": 1.055496, 
            "RSC": 0.1865822
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.21109379854
        }, 
        "rep1-pr1": {
            "FRiP": 0.164797107679
        }, 
        "rep1-pr2": {
            "FRiP": 0.165571720743
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.117796383701
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.20437071194, 
            "auc": 0.489593573553, 
            "ch_div": 0.211038558582, 
            "elbow_pt": 2.56465427574e-78, 
            "jsd": 0.657631144362, 
            "syn_auc": 0.493739172683, 
            "syn_elbow_pt": 0.180076920598, 
            "syn_jsd": 0.3425711938
        }
    ]
}