{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 41745448, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40417194, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35093654, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31564760, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.94, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32305073, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 16888919, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.522795
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24244617, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 19572922, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.80731
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32303158, 
            "distinct_read_pairs": 15807754, 
            "one_read_pair": 7412727, 
            "two_read_pair": 4116834, 
            "NRF": 0.489356, 
            "PBC1": 0.46893, 
            "PBC2": 1.800589
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24225649, 
            "distinct_read_pairs": 5031590, 
            "one_read_pair": 1641098, 
            "two_read_pair": 483849, 
            "NRF": 0.207697, 
            "PBC1": 0.326159, 
            "PBC2": 3.391757
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 15416154, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15416154, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 4671695, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 4671695, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 68900, 
        "Np": 0, 
        "N_opt": 68900, 
        "N_consv": 68900, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.157796506936549, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1342656, 
            "argmin_corr": 1500, 
            "min_corr": 0.1264749, 
            "NSC": 1.247651, 
            "RSC": 4.020387
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.195346142197
        }, 
        "rep1-pr1": {
            "FRiP": 0.216037768407
        }, 
        "rep1-pr2": {
            "FRiP": 0.216161829777
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.151394165153
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.131148499122, 
            "auc": 0.486170101731, 
            "ch_div": 0.375663269182, 
            "elbow_pt": 6.11880900422e-44, 
            "jsd": 0.768536549281, 
            "syn_auc": 0.519878262721, 
            "syn_elbow_pt": 0.257976698792, 
            "syn_jsd": 0.419015112909
        }
    ]
}
