{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 44281171, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43672689, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.63, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 41947380, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41602161, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.18, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35701020, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13343608, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.37376
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33899656, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 760876, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022445
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35699640, 
            "distinct_read_pairs": 22565693, 
            "one_read_pair": 13982296, 
            "two_read_pair": 5465636, 
            "NRF": 0.632099, 
            "PBC1": 0.619626, 
            "PBC2": 2.558219
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33859109, 
            "distinct_read_pairs": 33137728, 
            "one_read_pair": 32468730, 
            "two_read_pair": 653646, 
            "NRF": 0.978695, 
            "PBC1": 0.979812, 
            "PBC2": 49.673264
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22357412, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22357412, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 33138780, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33138780, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 105618, 
        "Np": 0, 
        "N_opt": 105618, 
        "N_consv": 105618, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.191176777812533, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1783471, 
            "argmin_corr": 1500, 
            "min_corr": 0.1704415, 
            "NSC": 1.121656, 
            "RSC": 2.622851
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.629212720231
        }, 
        "rep1-pr1": {
            "FRiP": 0.595159294518
        }, 
        "rep1-pr2": {
            "FRiP": 0.595073234828
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.584868541587
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0941067100775, 
            "auc": 0.488510321581, 
            "ch_div": 0.394330772891, 
            "elbow_pt": 4.60284390847e-64, 
            "jsd": 0.840009676633, 
            "syn_auc": 0.493665876968, 
            "syn_elbow_pt": 0.397080592107, 
            "syn_jsd": 0.524008511078
        }
    ]
}