/EXTERNAL BLUEPRINT/K010523_1_lane_gembs/EXTERNAL-K010523_1798765_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 349415464 | 100.00 % | 174707732 | 100.00 % | 174707732 | 100.00 % |
| General Reads | 344246992 | 98.52 % | 173585738 | 99.36 % | 170661254 | 97.68 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5168470 | 1.48 % | 1121993 | 0.64 % | 4046477 | 2.32 % |
| Bisulfite_reads C2T | 175218989 | 50.15 % | 88325146 | 50.56 % | 86893843 | 49.74 % |
| Bisulfite_reads G2A | 169028005 | 48.37 % | 85260593 | 48.80 % | 83767412 | 47.95 % |
| Concept | Value |
|---|---|
| Unique Fragments | 145014190 |
| Average Unique | 83.00 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 13815915360 | 38.76 % | 6204555898 | 34.82 % | 7611359462 | 42.71 % |
| Base Counts Overall C | 3701777153 | 10.39 % | 172011411 | 0.97 % | 3529765742 | 19.81 % |
| Base Counts Overall G | 3704606530 | 10.39 % | 3503973001 | 19.66 % | 200633529 | 1.13 % |
| Base Counts Overall T | 14011570116 | 39.31 % | 7762877363 | 43.56 % | 6248692753 | 35.07 % |
| Base Counts Overall N | 406508169 | 1.14 % | 176770991 | 0.99 % | 229737178 | 1.29 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 164861626 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 174707732 |
| 101 | 174707732 |
| Insert Size Histogram |
|---|
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