{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 29994548, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25745711, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.83, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 44889430, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44125133, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21519169, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8823336, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.410022
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35166445, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 565376, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016077
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21515740, 
            "distinct_read_pairs": 12911239, 
            "one_read_pair": 7848493, 
            "two_read_pair": 2884638, 
            "NRF": 0.600083, 
            "PBC1": 0.607881, 
            "PBC2": 2.72079
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 35154683, 
            "distinct_read_pairs": 34604874, 
            "one_read_pair": 34111098, 
            "two_read_pair": 483260, 
            "NRF": 0.98436, 
            "PBC1": 0.985731, 
            "PBC2": 70.585395
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12695833, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12695833, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 34601069, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34601069, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 31996, 
        "Np": 0, 
        "N_opt": 31996, 
        "N_consv": 31996, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.236781320165125, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1868477, 
            "argmin_corr": 1500, 
            "min_corr": 0.1248305, 
            "NSC": 1.896822, 
            "RSC": 1.805157
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.376319885098
        }, 
        "rep1-pr1": {
            "FRiP": 0.389294455262
        }, 
        "rep1-pr2": {
            "FRiP": 0.389762238705
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.358013544765
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.14602620515, 
            "auc": 0.48474309164, 
            "ch_div": 0.345237857226, 
            "elbow_pt": 5.74660477194e-36, 
            "jsd": 0.785566622815, 
            "syn_auc": 0.502634003522, 
            "syn_elbow_pt": 0.370059768354, 
            "syn_jsd": 0.439054278862
        }
    ]
}