{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 63011764, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58978109, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.6, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 79405907, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77204906, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.23, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 47985479, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 14949126, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.311534
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 61555123, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1094503, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017781
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 47982626, 
            "distinct_read_pairs": 33505509, 
            "one_read_pair": 22976536, 
            "two_read_pair": 7563338, 
            "NRF": 0.698284, 
            "PBC1": 0.685754, 
            "PBC2": 3.037883
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 61533587, 
            "distinct_read_pairs": 60480946, 
            "one_read_pair": 59556633, 
            "two_read_pair": 905952, 
            "NRF": 0.982893, 
            "PBC1": 0.984717, 
            "PBC2": 65.739281
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33036353, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33036353, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 60460620, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 60460620, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 39296, 
        "Np": 0, 
        "N_opt": 39296, 
        "N_consv": 39296, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.197829500485084, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.1872363, 
            "argmin_corr": 1500, 
            "min_corr": 0.1514812, 
            "NSC": 1.305968, 
            "RSC": 1.296269
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.210531901664
        }, 
        "rep1-pr1": {
            "FRiP": 0.203605678096
        }, 
        "rep1-pr2": {
            "FRiP": 0.20351008093
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.19067965771
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.242744493832, 
            "auc": 0.490546642766, 
            "ch_div": 0.141585878599, 
            "elbow_pt": 3.85041653455e-95, 
            "jsd": 0.648304500207, 
            "syn_auc": 0.496219061045, 
            "syn_elbow_pt": 0.245409094792, 
            "syn_jsd": 0.336756897141
        }
    ]
}