{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 44251011, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42738833, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.58, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38864082, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38480417, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.01, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33654313, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1183083, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.035154
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30624239, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 464822, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.015178
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33653160, 
            "distinct_read_pairs": 32499442, 
            "one_read_pair": 31408623, 
            "two_read_pair": 1055198, 
            "NRF": 0.965717, 
            "PBC1": 0.966436, 
            "PBC2": 29.76562
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30608853, 
            "distinct_read_pairs": 30158498, 
            "one_read_pair": 29763388, 
            "two_read_pair": 387680, 
            "NRF": 0.985287, 
            "PBC1": 0.986899, 
            "PBC2": 76.773081
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 32471230, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32471230, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 30159417, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30159417, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 32349, 
        "Np": 0, 
        "N_opt": 32349, 
        "N_consv": 32349, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.177216438807763, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1884286, 
            "argmin_corr": 1500, 
            "min_corr": 0.1731964, 
            "NSC": 1.023211, 
            "RSC": 0.263919
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0762344160334
        }, 
        "rep1-pr1": {
            "FRiP": 0.0809663595046
        }, 
        "rep1-pr2": {
            "FRiP": 0.0808306090363
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.052144814479
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.27537969241, 
            "auc": 0.490472168853, 
            "ch_div": 0.133323603386, 
            "elbow_pt": 1.21592871076e-93, 
            "jsd": 0.590196611579, 
            "syn_auc": 0.508798005608, 
            "syn_elbow_pt": 0.0894294937295, 
            "syn_jsd": 0.257067547499
        }
    ]
}
