{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 44675758, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43094508, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.46, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39111963, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38676387, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.89, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 37784441, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9979579, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.264119
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30831833, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 882052, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.028608
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37781926, 
            "distinct_read_pairs": 28415004, 
            "one_read_pair": 21449723, 
            "two_read_pair": 5205491, 
            "NRF": 0.752079, 
            "PBC1": 0.754873, 
            "PBC2": 4.120596
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30804577, 
            "distinct_read_pairs": 29956045, 
            "one_read_pair": 29167661, 
            "two_read_pair": 766562, 
            "NRF": 0.972454, 
            "PBC1": 0.973682, 
            "PBC2": 38.04997
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 27804862, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27804862, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29949781, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29949781, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 38492, 
        "Np": 0, 
        "N_opt": 38492, 
        "N_consv": 38492, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.352373336915598, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.318964, 
            "argmin_corr": 1500, 
            "min_corr": 0.1686599, 
            "NSC": 2.089254, 
            "RSC": 1.222278
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.48964122922
        }, 
        "rep1-pr1": {
            "FRiP": 0.476319321661
        }, 
        "rep1-pr2": {
            "FRiP": 0.476366976754
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.465448841942
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.117612220057, 
            "auc": 0.489669629407, 
            "ch_div": 0.28331140763, 
            "elbow_pt": 1.71634612863e-79, 
            "jsd": 0.809016462271, 
            "syn_auc": 0.501999090551, 
            "syn_elbow_pt": 0.447042944485, 
            "syn_jsd": 0.534376367386
        }
    ]
}
