{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 55908450, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48552369, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35638614, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35210182, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.8, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 36286563, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3260532, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.089855
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27928287, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 618861, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022159
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36282835, 
            "distinct_read_pairs": 33078086, 
            "one_read_pair": 30200045, 
            "two_read_pair": 2607334, 
            "NRF": 0.911673, 
            "PBC1": 0.912993, 
            "PBC2": 11.58273
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27913275, 
            "distinct_read_pairs": 27314045, 
            "one_read_pair": 26755951, 
            "two_read_pair": 544586, 
            "NRF": 0.978532, 
            "PBC1": 0.979568, 
            "PBC2": 49.130809
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33026031, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33026031, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27309426, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27309426, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 5414, 
        "Np": 0, 
        "N_opt": 5414, 
        "N_consv": 5414, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.175589003533638, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1912624, 
            "argmin_corr": 1500, 
            "min_corr": 0.1703536, 
            "NSC": 1.030733, 
            "RSC": 0.2503917
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.008191134796
        }, 
        "rep1-pr1": {
            "FRiP": 0.0241215370369
        }, 
        "rep1-pr2": {
            "FRiP": 0.0240483168437
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00346267553551
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.308442392505, 
            "auc": 0.490554914035, 
            "ch_div": 0.123155142011, 
            "elbow_pt": 2.58623253629e-95, 
            "jsd": 0.52980962625, 
            "syn_auc": 0.512246588692, 
            "syn_elbow_pt": 0.0284375880216, 
            "syn_jsd": 0.204847841862
        }
    ]
}
