{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 47838996, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42797737, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.46, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 80910702, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79260428, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35849572, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13449334, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.37516
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 63455646, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2113705, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.03331
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35846807, 
            "distinct_read_pairs": 22726471, 
            "one_read_pair": 14063112, 
            "two_read_pair": 5670106, 
            "NRF": 0.633989, 
            "PBC1": 0.618799, 
            "PBC2": 2.48022
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63376113, 
            "distinct_read_pairs": 61383889, 
            "one_read_pair": 59547171, 
            "two_read_pair": 1779955, 
            "NRF": 0.968565, 
            "PBC1": 0.970078, 
            "PBC2": 33.454313
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22400238, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22400238, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 61341941, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61341941, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 126887, 
        "Np": 0, 
        "N_opt": 126887, 
        "N_consv": 126887, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.168860080483896, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1531827, 
            "argmin_corr": 1500, 
            "min_corr": 0.1417885, 
            "NSC": 1.190929, 
            "RSC": 2.375909
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.400275561902
        }, 
        "rep1-pr1": {
            "FRiP": 0.372327589432
        }, 
        "rep1-pr2": {
            "FRiP": 0.371991887349
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.347943489496
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.166663408322, 
            "auc": 0.488528787915, 
            "ch_div": 0.241714982606, 
            "elbow_pt": 2.85522320298e-64, 
            "jsd": 0.738975968651, 
            "syn_auc": 0.510515865088, 
            "syn_elbow_pt": 0.310028842482, 
            "syn_jsd": 0.409652784326
        }
    ]
}