{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 39689789, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39153232, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 80910702, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79260428, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 31521744, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4811028, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.152626
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 63455646, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2113705, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.03331
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31519971, 
            "distinct_read_pairs": 26861164, 
            "one_read_pair": 22880038, 
            "two_read_pair": 3434116, 
            "NRF": 0.852195, 
            "PBC1": 0.851789, 
            "PBC2": 6.66257
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63376113, 
            "distinct_read_pairs": 61383889, 
            "one_read_pair": 59547171, 
            "two_read_pair": 1779955, 
            "NRF": 0.968565, 
            "PBC1": 0.970078, 
            "PBC2": 33.454313
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26710716, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26710716, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 61341941, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61341941, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 17779, 
        "Np": 0, 
        "N_opt": 17779, 
        "N_consv": 17779, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.171629965379483, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1737542, 
            "argmin_corr": 1500, 
            "min_corr": 0.1588399, 
            "NSC": 1.080522, 
            "RSC": 0.8575697
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0671913477934
        }, 
        "rep1-pr1": {
            "FRiP": 0.0662062977161
        }, 
        "rep1-pr2": {
            "FRiP": 0.0661332145632
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0564566981196
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.285059823002, 
            "auc": 0.489495421741, 
            "ch_div": 0.140411451877, 
            "elbow_pt": 7.68181826284e-77, 
            "jsd": 0.561271942101, 
            "syn_auc": 0.506103484567, 
            "syn_elbow_pt": 0.11315119933, 
            "syn_jsd": 0.238689423848
        }
    ]
}