{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40776819, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40084090, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38442836, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38079680, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.06, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32081615, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3280673, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.10226
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30107471, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 913404, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.030338
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32081015, 
            "distinct_read_pairs": 28879735, 
            "one_read_pair": 25986001, 
            "two_read_pair": 2636859, 
            "NRF": 0.900213, 
            "PBC1": 0.899801, 
            "PBC2": 9.854907
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30099034, 
            "distinct_read_pairs": 29206768, 
            "one_read_pair": 28369109, 
            "two_read_pair": 814080, 
            "NRF": 0.970356, 
            "PBC1": 0.97132, 
            "PBC2": 34.84806
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 28800942, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28800942, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29194067, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29194067, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 19652, 
        "Np": 0, 
        "N_opt": 19652, 
        "N_consv": 19652, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.17486324148599, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1776372, 
            "argmin_corr": 1500, 
            "min_corr": 0.1645706, 
            "NSC": 1.062543, 
            "RSC": 0.7877048
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0564141064276
        }, 
        "rep1-pr1": {
            "FRiP": 0.053261613969
        }, 
        "rep1-pr2": {
            "FRiP": 0.053146202612
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0384084556039
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.29041195325, 
            "auc": 0.489882477943, 
            "ch_div": 0.135100984857, 
            "elbow_pt": 6.41142165217e-83, 
            "jsd": 0.537790848785, 
            "syn_auc": 0.503848929084, 
            "syn_elbow_pt": 0.0728279385045, 
            "syn_jsd": 0.23080485601
        }
    ]
}