/EXTERNAL BLUEPRINT/K010374_K010526_2_lane_gembs/EXTERNAL-K010374_1798616_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 100163672 | 100.00 % | 50081836 | 100.00 % | 50081836 | 100.00 % |
| General Reads | 98224371 | 98.06 % | 49384038 | 98.61 % | 48840333 | 97.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 375656 | 0.38 % | 188789 | 0.38 % | 186867 | 0.37 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 1563645 | 1.56 % | 509009 | 1.02 % | 1054636 | 2.11 % |
| Bisulfite_reads C2T | 50510013 | 50.43 % | 25393130 | 50.70 % | 25116883 | 50.15 % |
| Bisulfite_reads G2A | 48090014 | 48.01 % | 24179697 | 48.28 % | 23910317 | 47.74 % |
| Concept | Value |
|---|---|
| Unique Fragments | 41677976 |
| Average Unique | 83.22 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 3992069599 | 39.07 % | 1540138147 | 30.15 % | 2451931452 | 48.00 % |
| Base Counts Overall C | 1051347297 | 10.29 % | 38250362 | 0.75 % | 1013096935 | 19.83 % |
| Base Counts Overall G | 1067869615 | 10.45 % | 1031291299 | 20.19 % | 36578316 | 0.72 % |
| Base Counts Overall T | 4000914084 | 39.16 % | 2447777967 | 47.92 % | 1553136117 | 30.40 % |
| Base Counts Overall N | 104493949 | 1.02 % | 50889497 | 1.00 % | 53604452 | 1.05 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9988668333162452 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 47834841 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 50081836 |
| 101 | 50081836 |
| Insert Size Histogram |
|---|
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