{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32593203, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30152460, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.51, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 36208930, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35786969, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.83, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25471208, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9917420, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.389358
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28627782, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 498271, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017405
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25469165, 
            "distinct_read_pairs": 15808677, 
            "one_read_pair": 9562943, 
            "two_read_pair": 3912475, 
            "NRF": 0.620699, 
            "PBC1": 0.604917, 
            "PBC2": 2.444218
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28589069, 
            "distinct_read_pairs": 28129066, 
            "one_read_pair": 27706033, 
            "two_read_pair": 414982, 
            "NRF": 0.98391, 
            "PBC1": 0.984961, 
            "PBC2": 66.764421
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 15553788, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15553788, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28129511, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28129511, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 56080, 
        "Np": 0, 
        "N_opt": 56080, 
        "N_consv": 56080, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.211161909730706, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1767505, 
            "argmin_corr": 1500, 
            "min_corr": 0.1432945, 
            "NSC": 1.473622, 
            "RSC": 2.028559
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.432120407694
        }, 
        "rep1-pr1": {
            "FRiP": 0.402551425289
        }, 
        "rep1-pr2": {
            "FRiP": 0.402337107203
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.378835035593
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.125986743537, 
            "auc": 0.486240651884, 
            "ch_div": 0.375221422945, 
            "elbow_pt": 2.13079316557e-44, 
            "jsd": 0.761027162547, 
            "syn_auc": 0.517257416758, 
            "syn_elbow_pt": 0.346450442781, 
            "syn_jsd": 0.450959403121
        }
    ]
}