{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 37084079, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35973249, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34988145, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32053618, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.61, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30111298, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3352718, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.111344
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 25361435, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 448949, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017702
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30109892, 
            "distinct_read_pairs": 26886148, 
            "one_read_pair": 24095125, 
            "two_read_pair": 2445504, 
            "NRF": 0.892934, 
            "PBC1": 0.896191, 
            "PBC2": 9.852826
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 25346615, 
            "distinct_read_pairs": 24912847, 
            "one_read_pair": 24508048, 
            "two_read_pair": 396003, 
            "NRF": 0.982887, 
            "PBC1": 0.983751, 
            "PBC2": 61.888541
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26758580, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26758580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 24912486, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24912486, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 44047, 
        "Np": 0, 
        "N_opt": 44047, 
        "N_consv": 44047, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.259667054117443, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2368822, 
            "argmin_corr": 1500, 
            "min_corr": 0.1757154, 
            "NSC": 1.477771, 
            "RSC": 1.372502
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.317512788455
        }, 
        "rep1-pr1": {
            "FRiP": 0.318741647618
        }, 
        "rep1-pr2": {
            "FRiP": 0.318818860082
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.306132358907
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.190039067156, 
            "auc": 0.489503872305, 
            "ch_div": 0.175239016822, 
            "elbow_pt": 5.72344627059e-77, 
            "jsd": 0.7471959758, 
            "syn_auc": 0.49731763719, 
            "syn_elbow_pt": 0.312377589238, 
            "syn_jsd": 0.420837722213
        }
    ]
}
