/EXTERNAL BLUEPRINT/K010527_1_lane_gembs/EXTERNAL-K010527_1798769_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 316140888 | 100.00 % | 158070444 | 100.00 % | 158070444 | 100.00 % |
| General Reads | 310867030 | 98.33 % | 156733907 | 99.15 % | 154133123 | 97.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5273856 | 1.67 % | 1336536 | 0.85 % | 3937320 | 2.49 % |
| Bisulfite_reads C2T | 159311816 | 50.39 % | 80298015 | 50.80 % | 79013801 | 49.99 % |
| Bisulfite_reads G2A | 151555216 | 47.94 % | 76435893 | 48.36 % | 75119323 | 47.52 % |
| Concept | Value |
|---|---|
| Unique Fragments | 130327342 |
| Average Unique | 82.45 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 12472236572 | 38.68 % | 5511186450 | 34.18 % | 6961050122 | 43.17 % |
| Base Counts Overall C | 3397097963 | 10.53 % | 166044492 | 1.03 % | 3231053471 | 20.04 % |
| Base Counts Overall G | 3399096615 | 10.54 % | 3211287283 | 19.92 % | 187809332 | 1.16 % |
| Base Counts Overall T | 12606850694 | 39.10 % | 7074742280 | 43.88 % | 5532108414 | 34.31 % |
| Base Counts Overall N | 371088732 | 1.15 % | 159924783 | 0.99 % | 211163949 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 149029235 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 158070444 |
| 101 | 158070444 |
| Insert Size Histogram |
|---|
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