/EXTERNAL BLUEPRINT/K006395_K006408_20_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 2000938676 | 100.00 % | 1000469338 | 100.00 % | 1000469338 | 100.00 % |
| General Reads | 1921694695 | 96.04 % | 963796137 | 96.33 % | 957898558 | 95.74 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 36569536 | 1.83 % | 18320648 | 1.83 % | 18248888 | 1.82 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 42674445 | 2.13 % | 18352553 | 1.83 % | 24321892 | 2.43 % |
| Bisulfite_reads C2T | 1019088382 | 50.93 % | 511100939 | 51.09 % | 507987443 | 50.77 % |
| Bisulfite_reads G2A | 939175849 | 46.94 % | 471015846 | 47.08 % | 468160003 | 46.79 % |
| Concept | Value |
|---|---|
| Unique Fragments | 807180398 |
| Average Unique | 80.68 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 74892683903 | 36.69 % | 29386536003 | 28.80 % | 45506147900 | 44.59 % |
| Base Counts Overall C | 26253022440 | 12.86 % | 1369103991 | 1.34 % | 24883918449 | 24.38 % |
| Base Counts Overall G | 26458522809 | 12.96 % | 25128764500 | 24.62 % | 1329758309 | 1.30 % |
| Base Counts Overall T | 74418864586 | 36.46 % | 45146245452 | 44.24 % | 29272619134 | 28.69 % |
| Base Counts Overall N | 2072651214 | 1.02 % | 1017222530 | 1.00 % | 1055428684 | 1.03 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9991684180921112 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 949758008 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
 |
| LANE REPORTS |
|---|
| UMCG00023.Bisulfite-Seq.DNA_Methylation.EGAX00001345080_9 |
| UMCG00023.Bisulfite-Seq.DNA_Methylation.EGAX00001345066_11 |