{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32966618, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31567691, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.76, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 25470508, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24486791, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.14, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 26873680, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1974654, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.073479
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 19434904, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 469410, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.024153
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 26873335, 
            "distinct_read_pairs": 24941338, 
            "one_read_pair": 23145280, 
            "two_read_pair": 1672688, 
            "NRF": 0.928107, 
            "PBC1": 0.927989, 
            "PBC2": 13.837177
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 19427870, 
            "distinct_read_pairs": 18969453, 
            "one_read_pair": 18540526, 
            "two_read_pair": 418410, 
            "NRF": 0.976404, 
            "PBC1": 0.977389, 
            "PBC2": 44.311862
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24899026, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24899026, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 18965494, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18965494, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 142727, 
        "Np": 0, 
        "N_opt": 142727, 
        "N_consv": 142727, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.217668076773398, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2133812, 
            "argmin_corr": 1500, 
            "min_corr": 0.1882501, 
            "NSC": 1.156271, 
            "RSC": 1.17058
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.562093758944
        }, 
        "rep1-pr1": {
            "FRiP": 0.562381524949
        }, 
        "rep1-pr2": {
            "FRiP": 0.562543139799
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.537912699224
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.106886278785, 
            "auc": 0.489110588442, 
            "ch_div": 0.323525413156, 
            "elbow_pt": 1.95424080798e-71, 
            "jsd": 0.82697221367, 
            "syn_auc": 0.491490672625, 
            "syn_elbow_pt": 0.394174931377, 
            "syn_jsd": 0.522187354773
        }
    ]
}