{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35491639, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34421926, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.99, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33608178, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32994818, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.17, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 29303809, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6815366, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.232576
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26296633, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 674350, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025644
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29303243, 
            "distinct_read_pairs": 22820625, 
            "one_read_pair": 17682103, 
            "two_read_pair": 4054876, 
            "NRF": 0.778775, 
            "PBC1": 0.77483, 
            "PBC2": 4.360701
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26287928, 
            "distinct_read_pairs": 25633709, 
            "one_read_pair": 25021518, 
            "two_read_pair": 596449, 
            "NRF": 0.975113, 
            "PBC1": 0.976118, 
            "PBC2": 41.950809
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22488443, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22488443, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 25622283, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25622283, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 69154, 
        "Np": 0, 
        "N_opt": 69154, 
        "N_consv": 69154, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.241234112017559, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2143831, 
            "argmin_corr": 1500, 
            "min_corr": 0.1747852, 
            "NSC": 1.380175, 
            "RSC": 1.678092
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.470909878804
        }, 
        "rep1-pr1": {
            "FRiP": 0.450300773799
        }, 
        "rep1-pr2": {
            "FRiP": 0.450181105527
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.435308750291
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.13096515599, 
            "auc": 0.488554915828, 
            "ch_div": 0.290346959258, 
            "elbow_pt": 1.42169094979e-64, 
            "jsd": 0.784956835021, 
            "syn_auc": 0.520120652091, 
            "syn_elbow_pt": 0.377437677007, 
            "syn_jsd": 0.483812425467
        }
    ]
}