{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40574162, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38631428, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.21, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 36550792, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36137246, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.87, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32335452, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7126524, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.220394
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28540658, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 718743, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025183
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32333197, 
            "distinct_read_pairs": 25418087, 
            "one_read_pair": 19915625, 
            "two_read_pair": 4396225, 
            "NRF": 0.78613, 
            "PBC1": 0.783522, 
            "PBC2": 4.530165
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28530059, 
            "distinct_read_pairs": 27829434, 
            "one_read_pair": 27179732, 
            "two_read_pair": 633950, 
            "NRF": 0.975443, 
            "PBC1": 0.976654, 
            "PBC2": 42.873621
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 25208928, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25208928, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27821915, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27821915, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 54791, 
        "Np": 0, 
        "N_opt": 54791, 
        "N_consv": 54791, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.256535287040739, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2300971, 
            "argmin_corr": 1500, 
            "min_corr": 0.1610076, 
            "NSC": 1.593312, 
            "RSC": 1.382667
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.367153015893
        }, 
        "rep1-pr1": {
            "FRiP": 0.355408107758
        }, 
        "rep1-pr2": {
            "FRiP": 0.355335033584
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.338429311487
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.170528646293, 
            "auc": 0.489194746168, 
            "ch_div": 0.205130614546, 
            "elbow_pt": 1.43618027656e-72, 
            "jsd": 0.774310539932, 
            "syn_auc": 0.502983226318, 
            "syn_elbow_pt": 0.342512087807, 
            "syn_jsd": 0.442420454334
        }
    ]
}