{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35901188, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35259946, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.21, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35115111, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34707217, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 31134938, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5154091, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.16554
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27662080, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 372523, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.013467
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31133934, 
            "distinct_read_pairs": 26391594, 
            "one_read_pair": 22618502, 
            "two_read_pair": 3011226, 
            "NRF": 0.847679, 
            "PBC1": 0.857034, 
            "PBC2": 7.511393
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27647408, 
            "distinct_read_pairs": 27288670, 
            "one_read_pair": 26951426, 
            "two_read_pair": 331531, 
            "NRF": 0.987025, 
            "PBC1": 0.987642, 
            "PBC2": 81.293834
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 25980847, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25980847, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27289557, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27289557, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 33159, 
        "Np": 0, 
        "N_opt": 33159, 
        "N_consv": 33159, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.449075429618967, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.4136735, 
            "argmin_corr": 1500, 
            "min_corr": 0.1970557, 
            "NSC": 2.278926, 
            "RSC": 1.16343
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.626289496285
        }, 
        "rep1-pr1": {
            "FRiP": 0.620017265647
        }, 
        "rep1-pr2": {
            "FRiP": 0.619998481904
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.619593861596
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0956116142489, 
            "auc": 0.489320979436, 
            "ch_div": 0.282743605225, 
            "elbow_pt": 2.56094571564e-74, 
            "jsd": 0.924472283645, 
            "syn_auc": 0.501435434207, 
            "syn_elbow_pt": 0.549949401576, 
            "syn_jsd": 0.613800806478
        }
    ]
}
