{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 28737816, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28056067, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.63, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 41122265, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36976280, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 23398627, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4255237, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.181858
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29602890, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 502247, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016966
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23397715, 
            "distinct_read_pairs": 19236393, 
            "one_read_pair": 15779481, 
            "two_read_pair": 2877028, 
            "NRF": 0.822148, 
            "PBC1": 0.820293, 
            "PBC2": 5.484646
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29584203, 
            "distinct_read_pairs": 29104011, 
            "one_read_pair": 28670808, 
            "two_read_pair": 423960, 
            "NRF": 0.983769, 
            "PBC1": 0.985115, 
            "PBC2": 67.62621
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19143390, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19143390, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29100643, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29100643, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 47986, 
        "Np": 0, 
        "N_opt": 47986, 
        "N_consv": 47986, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.231695452067346, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2079695, 
            "argmin_corr": 1500, 
            "min_corr": 0.1571474, 
            "NSC": 1.474383, 
            "RSC": 1.466844
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.300965022474
        }, 
        "rep1-pr1": {
            "FRiP": 0.291753227242
        }, 
        "rep1-pr2": {
            "FRiP": 0.292066798233
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.271245228524
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.186069175418, 
            "auc": 0.487588658136, 
            "ch_div": 0.226389216553, 
            "elbow_pt": 9.16842680248e-55, 
            "jsd": 0.73911278875, 
            "syn_auc": 0.512996451002, 
            "syn_elbow_pt": 0.295571718709, 
            "syn_jsd": 0.395706056835
        }
    ]
}
