{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 30579942, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29843386, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.59, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31649372, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30643974, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 24103737, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5474628, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.227128
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24459097, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 584539, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.023899
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24103198, 
            "distinct_read_pairs": 18728634, 
            "one_read_pair": 14454536, 
            "two_read_pair": 3377523, 
            "NRF": 0.777019, 
            "PBC1": 0.771788, 
            "PBC2": 4.279626
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24448578, 
            "distinct_read_pairs": 23875869, 
            "one_read_pair": 23340801, 
            "two_read_pair": 521995, 
            "NRF": 0.976575, 
            "PBC1": 0.97759, 
            "PBC2": 44.714606
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 18629109, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18629109, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23874558, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23874558, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 116553, 
        "Np": 0, 
        "N_opt": 116553, 
        "N_consv": 116553, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.181074088349493, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1728962, 
            "argmin_corr": 1500, 
            "min_corr": 0.1642786, 
            "NSC": 1.102238, 
            "RSC": 1.948974
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.458154621632
        }, 
        "rep1-pr1": {
            "FRiP": 0.431808231385
        }, 
        "rep1-pr2": {
            "FRiP": 0.431826697515
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.404986230923
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.144060904269, 
            "auc": 0.487425530169, 
            "ch_div": 0.293373905881, 
            "elbow_pt": 2.49636631906e-53, 
            "jsd": 0.744039074402, 
            "syn_auc": 0.489357029539, 
            "syn_elbow_pt": 0.317803392099, 
            "syn_jsd": 0.437677678773
        }
    ]
}