{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35270795, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32975842, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.49, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31649372, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30643974, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 23589713, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 851059, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.036078
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24459097, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 584539, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.023899
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23589051, 
            "distinct_read_pairs": 22753759, 
            "one_read_pair": 21994127, 
            "two_read_pair": 732451, 
            "NRF": 0.96459, 
            "PBC1": 0.966615, 
            "PBC2": 30.028121
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24448578, 
            "distinct_read_pairs": 23875869, 
            "one_read_pair": 23340801, 
            "two_read_pair": 521995, 
            "NRF": 0.976575, 
            "PBC1": 0.97759, 
            "PBC2": 44.714606
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22738654, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22738654, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23874558, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23874558, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 7711, 
        "Np": 0, 
        "N_opt": 7711, 
        "N_consv": 7711, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.187171375083678, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2153111, 
            "argmin_corr": 1500, 
            "min_corr": 0.1810395, 
            "NSC": 1.03387, 
            "RSC": 0.1789187
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0370776949655
        }, 
        "rep1-pr1": {
            "FRiP": 0.0252427232288
        }, 
        "rep1-pr2": {
            "FRiP": 0.0252703443692
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0101207945083
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.285143947167, 
            "auc": 0.488621115713, 
            "ch_div": 0.150453642133, 
            "elbow_pt": 2.47058393701e-65, 
            "jsd": 0.532210790645, 
            "syn_auc": 0.495528795123, 
            "syn_elbow_pt": 0.0513305136541, 
            "syn_jsd": 0.222935993986
        }
    ]
}