{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 50786464, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47044364, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.63, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32639701, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32231473, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.75, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 37930776, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7241483, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.190913
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 25455145, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 424364, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016671
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37929202, 
            "distinct_read_pairs": 30810992, 
            "one_read_pair": 24884236, 
            "two_read_pair": 4929361, 
            "NRF": 0.812329, 
            "PBC1": 0.807642, 
            "PBC2": 5.048167
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 25446499, 
            "distinct_read_pairs": 25032094, 
            "one_read_pair": 24655063, 
            "two_read_pair": 370398, 
            "NRF": 0.983715, 
            "PBC1": 0.984938, 
            "PBC2": 66.563704
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 30689293, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30689293, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 25030781, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25030781, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 155221, 
        "Np": 0, 
        "N_opt": 155221, 
        "N_consv": 155221, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.191129542819156, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1860789, 
            "argmin_corr": 1500, 
            "min_corr": 0.1754022, 
            "NSC": 1.089665, 
            "RSC": 1.473058
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.420129929123
        }, 
        "rep1-pr1": {
            "FRiP": 0.419763728735
        }, 
        "rep1-pr2": {
            "FRiP": 0.419704878592
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.384671871027
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.159742624596, 
            "auc": 0.490194272234, 
            "ch_div": 0.200558205744, 
            "elbow_pt": 2.40908393939e-88, 
            "jsd": 0.777493432286, 
            "syn_auc": 0.516085151557, 
            "syn_elbow_pt": 0.314740035406, 
            "syn_jsd": 0.447386665829
        }
    ]
}
