{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 17827828, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16738606, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.89, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 49437523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48770580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 14167948, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5540251, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.391041
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38988288, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 694643, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017817
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 14166958, 
            "distinct_read_pairs": 8771863, 
            "one_read_pair": 5222767, 
            "two_read_pair": 2269400, 
            "NRF": 0.619178, 
            "PBC1": 0.5954, 
            "PBC2": 2.301387
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38972286, 
            "distinct_read_pairs": 38300593, 
            "one_read_pair": 37684587, 
            "two_read_pair": 604317, 
            "NRF": 0.982765, 
            "PBC1": 0.983917, 
            "PBC2": 62.358972
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 8627697, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 8627697, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 38293645, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38293645, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 55370, 
        "Np": 0, 
        "N_opt": 55370, 
        "N_consv": 55370, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.255603193513866, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.1946808, 
            "argmin_corr": 1500, 
            "min_corr": 0.1106149, 
            "NSC": 2.310748, 
            "RSC": 1.724699
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.457465951526
        }, 
        "rep1-pr1": {
            "FRiP": 0.468809724506
        }, 
        "rep1-pr2": {
            "FRiP": 0.469031583223
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.40956301483
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0947070924064, 
            "auc": 0.481532667846, 
            "ch_div": 0.540513901162, 
            "elbow_pt": 2.41749216785e-24, 
            "jsd": 0.777457444809, 
            "syn_auc": 0.510553205, 
            "syn_elbow_pt": 0.383257784545, 
            "syn_jsd": 0.450898632852
        }
    ]
}