{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 41447949, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39526053, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.36, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 49437523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48770580, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 31759467, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4485624, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.141237
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 38988288, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 694643, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017817
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31757546, 
            "distinct_read_pairs": 27410443, 
            "one_read_pair": 23607553, 
            "two_read_pair": 3332981, 
            "NRF": 0.863116, 
            "PBC1": 0.861261, 
            "PBC2": 7.083015
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38972286, 
            "distinct_read_pairs": 38300593, 
            "one_read_pair": 37684587, 
            "two_read_pair": 604317, 
            "NRF": 0.982765, 
            "PBC1": 0.983917, 
            "PBC2": 62.358972
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 27273843, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27273843, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 38293645, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38293645, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 24606, 
        "Np": 0, 
        "N_opt": 24606, 
        "N_consv": 24606, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.182377324298026, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1783471, 
            "argmin_corr": 1500, 
            "min_corr": 0.1594669, 
            "NSC": 1.143669, 
            "RSC": 1.213466
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.111908909146
        }, 
        "rep1-pr1": {
            "FRiP": 0.107120458687
        }, 
        "rep1-pr2": {
            "FRiP": 0.10681333374
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0912483397066
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.269329455404, 
            "auc": 0.489600006843, 
            "ch_div": 0.142348462735, 
            "elbow_pt": 2.03685429144e-78, 
            "jsd": 0.588779104872, 
            "syn_auc": 0.516324786508, 
            "syn_elbow_pt": 0.150143515984, 
            "syn_jsd": 0.272766010073
        }
    ]
}
