{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 36234029, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35488709, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.94, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 36919106, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36529393, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.94, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32103786, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 10356138, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.322583
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29074997, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 445704, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.015329
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32102857, 
            "distinct_read_pairs": 22550122, 
            "one_read_pair": 16184225, 
            "two_read_pair": 4267923, 
            "NRF": 0.702433, 
            "PBC1": 0.7177, 
            "PBC2": 3.792061
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29049268, 
            "distinct_read_pairs": 28626759, 
            "one_read_pair": 28240749, 
            "two_read_pair": 379197, 
            "NRF": 0.985455, 
            "PBC1": 0.986516, 
            "PBC2": 74.475138
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21747648, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21747648, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28629293, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28629293, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 34125, 
        "Np": 0, 
        "N_opt": 34125, 
        "N_consv": 34125, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.597644647559851, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.5185354, 
            "argmin_corr": 1500, 
            "min_corr": 0.1707326, 
            "NSC": 3.500472, 
            "RSC": 1.227454
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.800270917298
        }, 
        "rep1-pr1": {
            "FRiP": 0.796048882096
        }, 
        "rep1-pr2": {
            "FRiP": 0.796031132405
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.794273867057
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0355570890167, 
            "auc": 0.488303865109, 
            "ch_div": 0.549114908012, 
            "elbow_pt": 8.7100305871e-62, 
            "jsd": 0.954319896676, 
            "syn_auc": 0.502758012897, 
            "syn_elbow_pt": 0.66942095813, 
            "syn_jsd": 0.722947364456
        }
    ]
}