{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 22492759, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22072692, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35440636, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35050543, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.9, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 20086142, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2966424, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.147685
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28093633, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 774414, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.027565
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 20085612, 
            "distinct_read_pairs": 17310783, 
            "one_read_pair": 14973827, 
            "two_read_pair": 1965927, 
            "NRF": 0.86185, 
            "PBC1": 0.865, 
            "PBC2": 7.616675
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28066312, 
            "distinct_read_pairs": 27325590, 
            "one_read_pair": 26636834, 
            "two_read_pair": 670593, 
            "NRF": 0.973608, 
            "PBC1": 0.974794, 
            "PBC2": 39.721312
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17119718, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17119718, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27319219, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27319219, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 39419, 
        "Np": 0, 
        "N_opt": 39419, 
        "N_consv": 39419, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.527328062738867, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.4725835, 
            "argmin_corr": 1500, 
            "min_corr": 0.2353938, 
            "NSC": 2.240195, 
            "RSC": 1.230805
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.828008039856
        }, 
        "rep1-pr1": {
            "FRiP": 0.822092649814
        }, 
        "rep1-pr2": {
            "FRiP": 0.821926967199
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.816867691289
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0243075063577, 
            "auc": 0.486857513925, 
            "ch_div": 0.678671822206, 
            "elbow_pt": 9.579776374e-49, 
            "jsd": 0.941994186023, 
            "syn_auc": 0.512753446113, 
            "syn_elbow_pt": 0.645062661447, 
            "syn_jsd": 0.713603990369
        }
    ]
}