{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 58375873, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51105115, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 87.54, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32776508, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32097620, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.93, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 40256145, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7988560, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.198443
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 25289141, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7412415, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.293107
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 40254429, 
            "distinct_read_pairs": 32532488, 
            "one_read_pair": 26195516, 
            "two_read_pair": 5201033, 
            "NRF": 0.808172, 
            "PBC1": 0.805211, 
            "PBC2": 5.036599
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 25270351, 
            "distinct_read_pairs": 17990310, 
            "one_read_pair": 12690252, 
            "two_read_pair": 3828234, 
            "NRF": 0.711914, 
            "PBC1": 0.705394, 
            "PBC2": 3.31491
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 32267585, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32267585, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 17876726, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17876726, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 18651, 
        "Np": 0, 
        "N_opt": 18651, 
        "N_consv": 18651, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.17233617677769, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.171386, 
            "argmin_corr": 1500, 
            "min_corr": 0.1587089, 
            "NSC": 1.085863, 
            "RSC": 1.07495
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0200096912363
        }, 
        "rep1-pr1": {
            "FRiP": 0.0553375466501
        }, 
        "rep1-pr2": {
            "FRiP": 0.055617284976
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0132942873927
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273096438474, 
            "auc": 0.490445468995, 
            "ch_div": 0.140247193976, 
            "elbow_pt": 4.06032171457e-93, 
            "jsd": 0.587233642692, 
            "syn_auc": 0.514523557897, 
            "syn_elbow_pt": 0.0537987758614, 
            "syn_jsd": 0.254435089157
        }
    ]
}