{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 59463759, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 57941072, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.44, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 86569823, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 82851398, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.7, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 46340684, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9816014, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.211823
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 66233405, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1506700, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022748
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46340173, 
            "distinct_read_pairs": 36742920, 
            "one_read_pair": 28917925, 
            "two_read_pair": 6353716, 
            "NRF": 0.792896, 
            "PBC1": 0.787034, 
            "PBC2": 4.551341
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 66205019, 
            "distinct_read_pairs": 64747119, 
            "one_read_pair": 63434072, 
            "two_read_pair": 1282673, 
            "NRF": 0.977979, 
            "PBC1": 0.97972, 
            "PBC2": 49.454594
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 36524670, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36524670, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 64726705, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64726705, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 167785, 
        "Np": 0, 
        "N_opt": 167785, 
        "N_consv": 167785, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.191372171179307, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1869886, 
            "argmin_corr": 1500, 
            "min_corr": 0.1789466, 
            "NSC": 1.069437, 
            "RSC": 1.54509
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.545848729145
        }, 
        "rep1-pr1": {
            "FRiP": 0.503412771463
        }, 
        "rep1-pr2": {
            "FRiP": 0.503424133957
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.492264226587
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.142907936463, 
            "auc": 0.491014190445, 
            "ch_div": 0.206919922668, 
            "elbow_pt": 1.98898565764e-105, 
            "jsd": 0.802342761291, 
            "syn_auc": 0.501807414365, 
            "syn_elbow_pt": 0.379527089587, 
            "syn_jsd": 0.481165537631
        }
    ]
}