{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 49882974, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49417832, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.07, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 44889430, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44125133, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 40937929, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2072371, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.050622
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35166445, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 565376, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016077
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 40937515, 
            "distinct_read_pairs": 38914703, 
            "one_read_pair": 37014012, 
            "two_read_pair": 1810233, 
            "NRF": 0.950588, 
            "PBC1": 0.951158, 
            "PBC2": 20.447098
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 35154683, 
            "distinct_read_pairs": 34604874, 
            "one_read_pair": 34111098, 
            "two_read_pair": 483260, 
            "NRF": 0.98436, 
            "PBC1": 0.985731, 
            "PBC2": 70.585395
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 38865558, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38865558, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 34601069, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34601069, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 116003, 
        "Np": 0, 
        "N_opt": 116003, 
        "N_consv": 116003, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.18297581493676, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1851922, 
            "argmin_corr": 1500, 
            "min_corr": 0.1732896, 
            "NSC": 1.055896, 
            "RSC": 0.8137923
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.326667896903
        }, 
        "rep1-pr1": {
            "FRiP": 0.313116123608
        }, 
        "rep1-pr2": {
            "FRiP": 0.313876753202
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.302071942458
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.219461991165, 
            "auc": 0.491301899206, 
            "ch_div": 0.139977008047, 
            "elbow_pt": 1.34224039249e-112, 
            "jsd": 0.723986604688, 
            "syn_auc": 0.512167340063, 
            "syn_elbow_pt": 0.233914094432, 
            "syn_jsd": 0.363207252647
        }
    ]
}