{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40090854, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39657107, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 37258811, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36917380, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.08, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33698562, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3754897, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.111426
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29401048, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 787808, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.026795
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33697366, 
            "distinct_read_pairs": 30085207, 
            "one_read_pair": 26944579, 
            "two_read_pair": 2752908, 
            "NRF": 0.892806, 
            "PBC1": 0.895609, 
            "PBC2": 9.787679
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29382562, 
            "distinct_read_pairs": 28618832, 
            "one_read_pair": 27903786, 
            "two_read_pair": 696308, 
            "NRF": 0.974007, 
            "PBC1": 0.975015, 
            "PBC2": 40.073913
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 29943665, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29943665, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28613240, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28613240, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 85744, 
        "Np": 0, 
        "N_opt": 85744, 
        "N_consv": 85744, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.265915707798642, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2500022, 
            "argmin_corr": 1500, 
            "min_corr": 0.1928572, 
            "NSC": 1.378822, 
            "RSC": 1.278476
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.501580373201
        }, 
        "rep1-pr1": {
            "FRiP": 0.49923366739
        }, 
        "rep1-pr2": {
            "FRiP": 0.498705356681
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.479368883362
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.127296502652, 
            "auc": 0.490070801934, 
            "ch_div": 0.23510218444, 
            "elbow_pt": 3.91152538571e-86, 
            "jsd": 0.821440138832, 
            "syn_auc": 0.491444194603, 
            "syn_elbow_pt": 0.411221564883, 
            "syn_jsd": 0.516890680357
        }
    ]
}