{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 17406202, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 14432949, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 82.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32965654, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32681766, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.14, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 11143049, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2895183, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.25982
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26073559, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 579287, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.022217
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 11142526, 
            "distinct_read_pairs": 8304318, 
            "one_read_pair": 6111259, 
            "two_read_pair": 1683661, 
            "NRF": 0.745281, 
            "PBC1": 0.735913, 
            "PBC2": 3.629744
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26064358, 
            "distinct_read_pairs": 25496975, 
            "one_read_pair": 24970476, 
            "two_read_pair": 515111, 
            "NRF": 0.978231, 
            "PBC1": 0.979351, 
            "PBC2": 48.475913
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 8247866, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 8247866, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 25494272, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25494272, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 16437, 
        "Np": 0, 
        "N_opt": 16437, 
        "N_consv": 16437, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 14432013, 
            "est_frag_len": 140, 
            "corr_est_frag_len": 0.186673128157482, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1760569, 
            "argmin_corr": 1500, 
            "min_corr": 0.1485865, 
            "NSC": 1.256326, 
            "RSC": 1.386459
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.251365356283
        }, 
        "rep1-pr1": {
            "FRiP": 0.252738957175
        }, 
        "rep1-pr2": {
            "FRiP": 0.253297249584
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.192781771792
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.161130823792, 
            "auc": 0.481068488238, 
            "ch_div": 0.415475414556, 
            "elbow_pt": 3.89221301486e-23, 
            "jsd": 0.696607580562, 
            "syn_auc": 0.501598630202, 
            "syn_elbow_pt": 0.258438730514, 
            "syn_jsd": 0.335103882817
        }
    ]
}
